mount_dir = '/Volumes/spacetop_projects_social/analysis/fmri/spm/univariate/model-02_CcEScsA_24dofcsd/1stLevel';
con_list = dir(fullfile(mount_dir, '*/con_0029.nii'));
con_fldr = {con_list.folder}; fname = {con_list.name};
con_files = strcat(con_fldr,'/', fname)';
con_data_obj = fmri_data(con_files);
Using default mask: /Users/h/Documents/MATLAB/CanlabCore/CanlabCore/canlab_canonical_brains/Canonical_brains_surfaces/brainmask_canlab.nii
loading mask. mapping volumes.
checking that dimensions and voxel sizes of volumes are the same.
Pre-allocating data array. Needed: 23960880 bytes
Loading image number: 60
Elapsed time is 15.172777 seconds.
Image names entered, but fullpath attribute is empty. Getting path info.
Number of unique values in dataset: 5793236 Bit rate: 22.47 bits
contrast_name = {'cue_P', 'cue_V', 'cue_C',...
'cueXcue_P', 'cueXcue_V', 'cueXcue_C',...
'stim_P', 'stim_V', 'stim_C',...
'stimXcue_P', 'stimXcue_V', 'stimXcue_C',...
'stimXint_P', 'stimXint_V', 'stimXint_C',...
'simple_cue_P', 'simple_cue_V', 'simple_cue_C','simple_cue_G',...
'simple_cueXcue_P', 'simple_cueXcue_V', 'simple_cueXcue_C','simple_cueXcue_G', ...
'simple_stim_P', 'simple_stim_V', 'simple_stim_C','simple_stim_G',...
'simple_stimXcue_P', 'simple_stimXcue_V', 'simple_stimXcue_C','simple_stimXcue_G',...
'simple_stimXint_P', 'simple_stimXint_V','simple_stimXint_C', 'simple_stimXint_G'};
disp(strcat("current length is ", num2str(size(con_data_obj.dat,2))))
%for s = 1:length(wh_outlier_corr)
%disp(strcat("-------subject", num2str(s), "------"))
con.dat = con_data_obj.dat(:,~wh_outlier_corr);
con.image_names = con_data_obj.image_names(~wh_outlier_corr,:)
con.fullpath = con_data_obj.fullpath(~wh_outlier_corr,:)
con.files_exist = con_data_obj.files_exist(~wh_outlier_corr,:)
disp(strcat("after removing ", num2str(sum(wh_outlier_corr)), " participants, size is now ",num2str(size(con.dat,2))))
after removing 2 participants, size is now 58
mount_dir = '/Volumes/spacetop_projects_social/analysis/fmri/spm/univariate/model-02_CcEScsA_24dofcsd/1stLevel';
con_list = dir(fullfile(mount_dir, '*/con_0030.nii'));
con_fldr = {con_list.folder}; fname = {con_list.name};
con_files = strcat(con_fldr,'/', fname)';
con_data_obj = fmri_data(con_files);
Using default mask: /Users/h/Documents/MATLAB/CanlabCore/CanlabCore/canlab_canonical_brains/Canonical_brains_surfaces/brainmask_canlab.nii
Direct calls to spm_defauts are deprecated.
Please use spm('Defaults',modality) or spm_get_defaults instead.
loading mask. mapping volumes.
checking that dimensions and voxel sizes of volumes are the same.
Pre-allocating data array. Needed: 23960880 bytes
Loading image number: 60
Elapsed time is 15.316588 seconds.
Image names entered, but fullpath attribute is empty. Getting path info.
Number of unique values in dataset: 5787458 Bit rate: 22.46 bits
contrast_name = {'cue_P', 'cue_V', 'cue_C',...
'cueXcue_P', 'cueXcue_V', 'cueXcue_C',...
'stim_P', 'stim_V', 'stim_C',...
'stimXcue_P', 'stimXcue_V', 'stimXcue_C',...
'stimXint_P', 'stimXint_V', 'stimXint_C',...
'simple_cue_P', 'simple_cue_V', 'simple_cue_C','simple_cue_G',...
'simple_cueXcue_P', 'simple_cueXcue_V', 'simple_cueXcue_C','simple_cueXcue_G', ...
'simple_stim_P', 'simple_stim_V', 'simple_stim_C','simple_stim_G',...
'simple_stimXcue_P', 'simple_stimXcue_V', 'simple_stimXcue_C','simple_stimXcue_G',...
'simple_stimXint_P', 'simple_stimXint_V','simple_stimXint_C', 'simple_stimXint_G'};
disp(strcat("current length is ", num2str(size(con_data_obj.dat,2))))
%for s = 1:length(wh_outlier_corr)
% disp(strcat("-------subject", num2str(s), "------"))
con.dat = con_data_obj.dat(:,~wh_outlier_corr);
con.image_names = con_data_obj.image_names(~wh_outlier_corr,:)
con.fullpath = con_data_obj.fullpath(~wh_outlier_corr,:)
con.files_exist = con_data_obj.files_exist(~wh_outlier_corr,:)
disp(strcat("after removing ", num2str(sum(wh_outlier_corr)), " participants, size is now ",num2str(size(con.dat,2))))
after removing 2 participants, size is now 58
mount_dir = '/Volumes/spacetop_projects_social/analysis/fmri/spm/univariate/model-02_CcEScsA_24dofcsd/1stLevel';
con_list = dir(fullfile(mount_dir, '*/con_0031.nii'));
con_fldr = {con_list.folder}; fname = {con_list.name};
con_files = strcat(con_fldr,'/', fname)';
con_data_obj = fmri_data(con_files);
Using default mask: /Users/h/Documents/MATLAB/CanlabCore/CanlabCore/canlab_canonical_brains/Canonical_brains_surfaces/brainmask_canlab.nii
loading mask. mapping volumes.
checking that dimensions and voxel sizes of volumes are the same.
Pre-allocating data array. Needed: 23960880 bytes
Loading image number: 60
Elapsed time is 14.833546 seconds.
Image names entered, but fullpath attribute is empty. Getting path info.
Number of unique values in dataset: 5786750 Bit rate: 22.46 bits
contrast_name = {'cue_P', 'cue_V', 'cue_C',...
'cueXcue_P', 'cueXcue_V', 'cueXcue_C',...
'stim_P', 'stim_V', 'stim_C',...
'stimXcue_P', 'stimXcue_V', 'stimXcue_C',...
'stimXint_P', 'stimXint_V', 'stimXint_C',...
'simple_cue_P', 'simple_cue_V', 'simple_cue_C','simple_cue_G',...
'simple_cueXcue_P', 'simple_cueXcue_V', 'simple_cueXcue_C','simple_cueXcue_G', ...
'simple_stim_P', 'simple_stim_V', 'simple_stim_C','simple_stim_G',...
'simple_stimXcue_P', 'simple_stimXcue_V', 'simple_stimXcue_C','simple_stimXcue_G',...
'simple_stimXint_P', 'simple_stimXint_V','simple_stimXint_C', 'simple_stimXint_G'};
disp(strcat("current length is ", num2str(size(con_data_obj.dat,2))))
%for s = 1:length(wh_outlier_corr)
% disp(strcat("-------subject", num2str(s), "------"))
con.dat = con_data_obj.dat(:,~wh_outlier_corr);
con.image_names = con_data_obj.image_names(~wh_outlier_corr,:)
con.fullpath = con_data_obj.fullpath(~wh_outlier_corr,:)
con.files_exist = con_data_obj.files_exist(~wh_outlier_corr,:)
disp(strcat("after removing ", num2str(sum(wh_outlier_corr)), " participants, size is now ",num2str(size(con.dat,2))))
after removing 2 participants, size is now 58
mount_dir = '/Volumes/spacetop_projects_social/analysis/fmri/spm/univariate/model-02_CcEScsA_24dofcsd/1stLevel';
con_list = dir(fullfile(mount_dir, '*/con_0032.nii'));
con_fldr = {con_list.folder}; fname = {con_list.name};
con_files = strcat(con_fldr,'/', fname)';
con_data_obj = fmri_data(con_files);
Using default mask: /Users/h/Documents/MATLAB/CanlabCore/CanlabCore/canlab_canonical_brains/Canonical_brains_surfaces/brainmask_canlab.nii
loading mask. mapping volumes.
checking that dimensions and voxel sizes of volumes are the same.
Pre-allocating data array. Needed: 23960880 bytes
Loading image number: 60
Elapsed time is 14.444639 seconds.
Image names entered, but fullpath attribute is empty. Getting path info.
Number of unique values in dataset: 5794340 Bit rate: 22.47 bits
contrast_name = {'cue_P', 'cue_V', 'cue_C',...
'cueXcue_P', 'cueXcue_V', 'cueXcue_C',...
'stim_P', 'stim_V', 'stim_C',...
'stimXcue_P', 'stimXcue_V', 'stimXcue_C',...
'stimXint_P', 'stimXint_V', 'stimXint_C',...
'simple_cue_P', 'simple_cue_V', 'simple_cue_C','simple_cue_G',...
'simple_cueXcue_P', 'simple_cueXcue_V', 'simple_cueXcue_C','simple_cueXcue_G', ...
'simple_stim_P', 'simple_stim_V', 'simple_stim_C','simple_stim_G',...
'simple_stimXcue_P', 'simple_stimXcue_V', 'simple_stimXcue_C','simple_stimXcue_G',...
'simple_stimXint_P', 'simple_stimXint_V','simple_stimXint_C', 'simple_stimXint_G'};
disp(strcat("current length is ", num2str(size(con_data_obj.dat,2))))
%for s = 1:length(wh_outlier_corr)
% disp(strcat("-------subject", num2str(s), "------"))
con.dat = con_data_obj.dat(:,~wh_outlier_corr);
con.image_names = con_data_obj.image_names(~wh_outlier_corr,:)
con.fullpath = con_data_obj.fullpath(~wh_outlier_corr,:)
con.files_exist = con_data_obj.files_exist(~wh_outlier_corr,:)
disp(strcat("after removing ", num2str(sum(wh_outlier_corr)), " participants, size is now ",num2str(size(con.dat,2))))
after removing 0 participants, size is now 60